DNA Binding Motif
| Accessions: | MA1827.1 (JASPAR 2024) |
| Names: | Zm00001d044785 |
| Organisms: | Zea mays |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | ChIP-seq |
| Length: | 11 |
| Consensus: | atCCTTATCyt |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 165 149 147 142 a 02 145 129 119 210 t 03 12 510 29 52 C 04 19 530 32 22 C 05 48 28 26 501 T 06 37 47 31 488 T 07 511 41 35 16 A 08 3 10 11 579 T 09 7 575 4 17 C 10 69 247 107 180 y 11 130 150 139 184 t |
| Type: | Heterodimer |
| Binding TFs: | K7W4V3 (Myb-like DNA-binding domain) K7W4V3 |
| Binding Sites: | MA1827.1.13 / MA1827.1.14 MA1827.1.1 MA1827.1.10 / MA1827.1.11 MA1827.1.11 / MA1827.1.12 MA1827.1.12 / MA1827.1.13 MA1827.1.14 / MA1827.1.15 MA1827.1.15 / MA1827.1.16 MA1827.1.16 / MA1827.1.18 MA1827.1.17 / MA1827.1.19 MA1827.1.18 / MA1827.1.20 MA1827.1.19 MA1827.1.2 / MA1827.1.3 / MA1827.1.4 MA1827.1.20 MA1827.1.4 / MA1827.1.5 MA1827.1.5 / MA1827.1.6 MA1827.1.6 / MA1827.1.7 MA1827.1.7 / MA1827.1.8 MA1827.1.8 / MA1827.1.9 MA1827.1.10 / MA1827.1.9 MA1827.1.17 MA1827.1.3 |
| Publications: | Giuliano G., Pichersky E., Malik V. S., Timko M. P., Scolnik P. A., Cashmore A. R. An evolutionarily conserved protein binding sequence upstream of a plant light-regulated gene. Proc. Natl. Acad. Sci. USA 85:7089-7093 (1988). [Pubmed] |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.