DNA Binding Motif

						

			
Accessions: HOXB1_methyl_1 (HT-SELEX2 May2017)

			
Names: HOXB1
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 8
Consensus: GTAATtAs
Weblogo: 
PSSM: P0      A      C      G      T
01      0    309   1196      0      G
02      0    347      0   1196      T
03   1196    315    233      0      A
04   1196      0      0      0      A
05      0      0     53   1196      T
06      0    343    315   1196      t
07   1196      0    284      0      A
08    246    320    372    258      s
Binding TFs: HOXB1 (Homeobox domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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