DNA Binding Motif

						

			
Accessions: HOXA13_methyl_2 (HT-SELEX2 May2017)

			
Names: HOXA13
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 11
Consensus: asYAATAAAAm
Weblogo: 
PSSM: P0      A      C      G      T
01    261    212    194    184      a
02    116    851    418    102      s
03     11    851      0    307      Y
04    851    194      0     95      A
05    851      0     25     20      A
06      0      0      0    851      T
07    851      0      0     32      A
08    851      0      0     36      A
09    851     19      0     30      A
10    851    225     43     87      A
11    348    503     73    219      m
Binding TFs: HOXA13 (Homeobox domain, Hox protein A13 N terminal)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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