DNA Binding Motif

						

			
Accessions: FOXO1_HOXB13_1 (HumanTF2 1.0)

			
Names: FOXO1_HOXB13
Organisms: Homo sapiens
Libraries: HumanTF2 1.0 1
1 Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]
Notes: Site type: heterodimeric; Experiment type: CAP-SELEX
Length: 17
Consensus: vwmmACAmmcymrTaAA
Weblogo: 
PSSM: P0      A      C      G      T
01    314    228    289     16      v
02    145     43     24    143      w
03    100    189      9     19      m
04    289    126      0     21      m
05    289      7     34      7      A
06     17    289      1     69      C
07    289     10     14     16      A
08    103    102     24     60      m
09     93     88     71     37      m
10     54    201     88     28      c
11     39    156      8    133      y
12    137    152      6     63      m
13    192     10     96     14      r
14      0     10      1    289      T
15    289     23     16     98      a
16    289      0      3     23      A
17    289     69     15     46      A
Type: Heterodimer
Binding TFs: FOXO1_TF1 / FOXO1_TF2 (Fork head domain)
HOXB13_TF1 / HOXB13_TF2 (Homeobox domain)
HOXB13_Full (Homeobox domain, Hox protein A13 N terminal)
			
Publications: Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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