DNA Binding Motif

						

			
Accessions: 5yi3_I (3D-footprint 20231221)

			
Names: Zinc transport transcriptional regulator
Organisms: Lactococcus lactis, Lactococcus lactis subsp. lactis (strain IL1403)
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: Structure of Lactococcus lactis ZitR, C30S mutant in complex with DNA
Length: 6
Consensus: TTAACT
Weblogo: 
PSSM: P0      A      C      G      T
01      6      6      6     78      T
02      6      6      6     78      T
03     78      6      6      6      A
04     78      6      6      6      A
05      0     96      0      0      C
06      6      6      6     78      T
Binding TFs: 5yi3_I (Bacterial regulatory protein, arsR family, MarR family, Iron dependent repressor, N-terminal DNA binding domain, TFIIE alpha subunit, Transcriptional regulator, MarR family, Winged helix-turn-helix DNA-binding, Winged helix DNA-binding domain)
Binding Sites: 5yi3_K / 5yi3_L
			
Publications: Zhu R, Song Y, Liu H, Yang Y, Wang S, Yi C, Chen PR. Allosteric histidine switch for regulation of intracellular zinc(II) fluctuation. Proc Natl Acad Sci U S A 114:13661-13666 (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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