DNA Binding Motif

						

			
Accessions: M0707 (AthalianaCistrome v4_May2016)

			
Names: SND2.DAP, T17861;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 15
Consensus: CTTswtcywyAmGyw
Weblogo: 
PSSM: P0      A      C      G      T
01      2    588      0      7      C
02      3      0    119    475      T
03      0      4      1    592      T
04     80    270    232     15      s
05    191     61     24    321      w
06    107    143    113    234      t
07    111    237    130    119      c
08    146    155     75    221      y
09    252     16     28    301      w
10     12    350     71    164      y
11    588      5      0      4      A
12    264    333      0      0      m
13     40      0    500     57      G
14     48    343     32    174      y
15    150    132      2    313      w
Binding TFs: T17861 (No apical meristem (NAM) protein)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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