DNA Binding Motif
| Accessions: | MA1865.1 (JASPAR 2024) |
| Names: | FoxG |
| Organisms: | Ciona intestinalis |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | SELEX |
| Length: | 20 |
| Consensus: | kkkkkkkTGTTTGtkkkkkk |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 216 178 288 318 k 02 225 176 294 305 k 03 217 182 292 309 k 04 207 176 281 336 k 05 218 184 300 297 k 06 232 164 258 346 k 07 221 150 278 352 k 08 37 32 46 884 T 09 89 26 845 40 G 10 30 30 42 899 T 11 43 23 68 866 T 12 61 28 73 838 T 13 92 34 810 64 G 14 158 206 245 390 t 15 204 151 292 353 k 16 209 163 282 346 k 17 227 170 290 312 k 18 210 185 272 333 k 19 227 172 289 312 k 20 221 175 284 320 k |
| Type: | Heterodimer |
| Binding TFs: | Q4H3I9 (Fork head domain) Q4H3I9 |
| Publications: | José-Edwards DS, Oda-Ishii I, Kugler JE, Passamaneck YJ, Katikala L, Nibu Y, Di Gregorio A. Brachyury, Foxa2 and the cis-Regulatory Origins of the Notochord. PLoS Genet : (2015). [Pubmed] |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.