DNA Binding Motif

						

			
Accessions: MA0799.2 (JASPAR 2024)

			
Names: RFX4
Organisms: Homo sapiens
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: CAP-SELEX
Length: 17
Consensus: ysGTTGCywrGCAACsr
Weblogo: 
PSSM: P0      A      C      G      T
01    108    335    210    221      y
02     85    502    373    181      s
03      5      1    875      1      G
04      1      7      3    875      T
05     13     45      1    875      T
06     37      7    875      9      G
07      0    875      3      3      C
08      6    434     11    441      y
09    429    107    109    445      w
10    457     11    418      5      r
11      2      3    875      0      G
12      8    875      9     36      C
13    875      1     43     11      A
14    875      3      6      1      A
15      1    875      0      5      C
16    167    363    511     84      s
17    223    202    346    103      r
Type: Heterodimer
Binding TFs: Q33E94 (RFX DNA-binding domain)
Q33E94
			
Publications: Emery P., Strubin M., Hofmann K., Bucher P., Mach B., Reith W. A consensus motif in the RFX DNA binding domain and binding domain mutants with altered specificity. Mol. Cell. Biol. 16:4486-4494 (1996). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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