DNA Binding Motif

						

			
Accessions: HOXB2_EOMES_1 (HumanTF2 1.0)

			
Names: HOXB2_EOMES
Organisms: Homo sapiens
Libraries: HumanTF2 1.0 1
1 Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]
Notes: Site type: heterodimeric; Experiment type: CAP-SELEX
Length: 12
Consensus: rgGYGyTAATkg
Weblogo: 
PSSM: P0      A      C      G      T
01    693    156    469    408      r
02    385    429   1161    384      g
03     61    170   1161    110      G
04     16    415     10   1161      Y
05     17      0   1161      0      G
06    515    636    222   1161      y
07    327     50    126   1161      T
08   1161      1    361     52      A
09   1161     12      6      0      A
10     43    178    130   1161      T
11    191    143    696    465      k
12    276    227    441    217      g
Type: Heterodimer
Binding TFs: EOMES_TF2 (T-box)
HOXB2_TF1 (Homeobox domain)
			
Publications: Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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