DNA Binding Motif

						

			
Accessions: 6jbx_AB (3D-footprint 20231221)

			
Names: Fatty acid biosynthesis transcriptional regulator
Organisms: strain ATCC BAA-255 / R6, Streptococcus pneumoniae
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: Crystal structure of Streptococcus pneumoniae FabT in complex with DNA
Length: 21
Consensus: ATnnTnYgnnnnTcnnAnnAT
Weblogo: 
PSSM: P0      A      C      G      T
01     87      3      3      3      A
02      0      0      0     96      T
03     24     24     24     24      n
04     24     24     24     24      n
05      0      0      0     96      T
06     24     24     24     24      n
07      0     24      3     69      Y
08     12      9     54     21      g
09     24     24     24     24      n
10     24     24     24     24      n
11     24     24     24     24      n
12     24     24     24     24      n
13      0      6      3     87      T
14     18     48     15     15      c
15     24     24     24     24      n
16     24     24     24     24      n
17     96      0      0      0      A
18     24     24     24     24      n
19     24     24     24     24      n
20     96      0      0      0      A
21      3      3      3     87      T
Type: Heterodimer
Binding TFs: 6jbx_A (MarR family, MarR family, Winged helix DNA-binding domain)
6jbx_B (MarR family, MarR family, Winged helix DNA-binding domain)
Binding Sites: 6jbx_C
6jbx_D
			
Publications: Zuo G, Chen ZP, Jiang YL, Zhu Z, Ding C, Zhang Z, Chen Y, Zhou CZ, Li Q. Structural insights into repression of the Pneumococcal fatty acid synthesis pathway by repressor FabT and co-repressor acyl-ACP. FEBS Lett 593:2730-2741 (2019). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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