DNA Binding Motif

						

			
Accessions: MA0418.1 (JASPAR 2024)

			
Names: YAP6
Organisms: Saccharomyces cerevisiae
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: PBM
Length: 20
Consensus: sgkywgmTTAyGTaAkcrrc
Weblogo: 
PSSM: P0      A      C      G      T
01    174    297    371    156      s
02    228    141    587     41      g
03    134     92    332    440      k
04    114    434    109    342      y
05    252    231     72    444      w
06     43    114    646    195      g
07    491    412     36     58      m
08     27     23     56    892      T
09     25     21    112    840      T
10    889     32     49     28      A
11     38    555    103    302      y
12    172     48    722     56      G
13     67     85     37    809      T
14    647    193     64     95      a
15    829     62     72     34      A
16    162     76    481    278      k
17    228    474    142    155      c
18    337     85    428    148      r
19    430    127    302    139      r
20    166    439    243    150      c
Type: Heterodimer
Binding TFs: Q03935 (bZIP transcription factor)
Q03935
			
Publications: Newburger D.E, Bulyk M.L. UniPROBE: an online database of protein binding microarray data on protein-DNA interactions. Nucleic acids research 37:D77-82 (2009). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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