DNA Binding Motif
| Accessions: | MA0484.2 (JASPAR 2024) |
| Names: | HNF4G |
| Organisms: | Homo sapiens |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | ChIP-seq |
| Length: | 13 |
| Consensus: | kyCAAAGTCCArr |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 3843 2786 5560 6033 k 02 3655 5660 3820 5087 y 03 434 16488 419 881 C 04 17011 449 456 306 A 05 15704 507 1576 435 A 06 16963 172 769 318 A 07 208 329 17215 470 G 08 277 227 841 16877 T 09 1118 14917 697 1490 C 10 564 16495 226 937 C 11 14053 1190 1299 1680 A 12 5008 4073 5326 3815 r 13 5812 3718 4662 4030 r |
| Type: | Heterodimer |
| Binding TFs: | Q14541 (Ligand-binding domain of nuclear hormone receptor, Zinc finger, C4 type (two domains)) Q14541 |
| Binding Sites: | MA0484.2.8 MA0484.2.5 / MA0484.2.9 MA0484.2.12 / MA0484.2.7 MA0484.2.1 MA0484.2.2 MA0484.2.4 MA0484.2.3 / MA0484.2.5 MA0484.2.4 / MA0484.2.6 MA0484.2.7 MA0484.2.10 / MA0484.2.6 MA0484.2.11 MA0484.2.13 MA0484.2.14 / MA0484.2.8 MA0484.2.15 / MA0484.2.9 MA0484.2.10 / MA0484.2.16 MA0484.2.11 / MA0484.2.17 MA0484.2.12 / MA0484.2.18 MA0484.2.13 / MA0484.2.19 MA0484.2.20 MA0484.2.3 MA0484.2.14 MA0484.2.15 MA0484.2.16 MA0484.2.17 MA0484.2.18 MA0484.2.19 MA0484.2.20 |
| Publications: | Fang B, Mane-Padros D, Bolotin E, Jiang T, Sladek F.M. Identification of a binding motif specific to HNF4 by comparative analysis of multiple nuclear receptors. Nucleic acids research 40:5343-56 (2012). [Pubmed] |
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