DNA Binding Motif

Accessions: UN0238.1 (JASPAR 2024)
Names: ZNF823
Organisms: Homo sapiens
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: ChIP-seq
Length: 12
Consensus: mgAGACAGAGrv
Weblogo:
PSSM: P0 A C G T
01 726 629 423 284 m
02 453 319 976 314 g
03 1884 119 31 28 A
04 31 109 1880 42 G
05 1943 11 85 23 A
06 155 1687 90 130 C
07 1973 13 59 17 A
08 30 43 1968 21 G
09 1657 52 274 79 A
10 110 72 1850 30 G
11 677 493 558 334 r
12 693 540 566 263 v
Type: Heterodimer
Binding TFs: P16415 (Zinc finger, C2H2 type, KRAB box, Zinc-finger double domain, C2H2-type zinc finger, C2H2-type zinc finger)
P16415
Binding Sites: UN0238.1.6
UN0238.1.20
UN0238.1.1
UN0238.1.10 / UN0238.1.7
UN0238.1.11 / UN0238.1.8
UN0238.1.12
UN0238.1.13
UN0238.1.14 / UN0238.1.9
UN0238.1.10 / UN0238.1.15
UN0238.1.16
UN0238.1.11 / UN0238.1.17
UN0238.1.18
UN0238.1.12 / UN0238.1.19
UN0238.1.2
UN0238.1.3
UN0238.1.4
UN0238.1.5
UN0238.1.7
UN0238.1.5 / UN0238.1.8
UN0238.1.6 / UN0238.1.9
UN0238.1.4
UN0238.1.13
UN0238.1.14
UN0238.1.15
UN0238.1.16
UN0238.1.17
UN0238.1.18
UN0238.1.19
UN0238.1.20

Disclaimer and license

These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.