DNA Binding Motif

						

			
Accessions: SPIB_methyl_1 (HT-SELEX2 May2017)

			
Names: SPIB
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 12
Consensus: aAwGrGGAAGTr
Weblogo: 
PSSM: P0      A      C      G      T
01   4013    706   2211   2006      a
02   4903    150    538   1320      A
03   3037    350   1170   3187      w
04   1203    808   6224    396      G
05   3346    675   2878     72      r
06      0      6   6224      8      G
07      0      0   6224      0      G
08   6224      0      0      0      A
09   6224      0      0      0      A
10     28     93   6224      0      G
11      0    111      0   6224      T
12   1885    384   2795   1159      r
Binding TFs: SPIB (Ets-domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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