DNA Binding Motif

						

			
Accessions: 3iag_C (3D-footprint 20231221)

			
Names: Recombining binding protein suppressor of hairless
Organisms: Mus musculus
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: CSL (RBP-Jk) bound to HES-1 nonconsensus site
Length: 7
Consensus: TCaCAyG
Weblogo: 
PSSM: P0      A      C      G      T
01      0      0      0     96      T
02      0     96      0      0      C
03     60     12     12     12      a
04      0     96      0      0      C
05     96      0      0      0      A
06     12     48     12     24      y
07      0      0     96      0      G
Binding TFs: 3iag_C (IPT/TIG domain, Beta-trefoil DNA-binding domain, LAG1, DNA binding)
Binding Sites: 3iag_A
3iag_B
			
Publications: Friedmann D.R, Kovall R.A. Thermodynamic and structural insights into CSL-DNA complexes. Protein science : a publication of the Protein Society 19:34-46 (2010). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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