DNA Binding Motif

Accessions: 1cjg_B (3D-footprint 20231221)
Names: PROTEIN (LAC REPRESSOR)
Organisms: Escherichia coli, strain K12
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: NMR STRUCTURE OF LAC REPRESSOR HP62-DNA COMPLEX
Length: 5
Consensus: TGAGC
Weblogo:
PSSM: P0 A C G T
01 9 9 9 69 T
02 9 9 69 9 G
03 67 11 9 9 A
04 0 0 96 0 G
05 0 96 0 0 C
Binding TFs: 1cjg_B (Bacterial regulatory proteins, lacI family)
Binding Sites: 1cjg_C / 1cjg_D
Publications: Spronk C.A, Bonvin A.M, Radha P.K, Melacini G, Boelens R, Kaptein R. The solution structure of Lac repressor headpiece 62 complexed to a symmetrical lac operator. Structure (London, England : 1993) 7:1483-92 (1999). [Pubmed]

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