DNA Binding Motif

						

			
Accessions: CDX2_2 (HT-SELEX2 May2017)

			
Names: CDX2
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 9
Consensus: gymATwamc
Weblogo: 
PSSM: P0      A      C      G      T
01    604    588   1358    303      g
02      0   1861      0    992      y
03   2853   4386    371    775      m
04   2853    345    768    157      A
05      0      0      0   2853      T
06   2853    581    209   1311      w
07   2853    440     13   1030      a
08   2853   1490    615    976      m
09    584   1016    658    595      c
Binding TFs: CDX2 (Homeobox domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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