DNA Binding Motif

Accessions: UN0422.1 (JASPAR 2024)
Names: LEC1-A
Organisms: Glycine max
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: ChIP-seq
Length: 11
Consensus: caCGTGGCAyw
Weblogo:
PSSM: P0 A C G T
01 3294 7023 2759 3467 c
02 9508 1783 2775 2477 a
03 942 14394 501 706 C
04 609 207 15158 569 G
05 452 435 174 15482 T
06 567 401 15073 502 G
07 892 820 12672 2159 G
08 1110 14415 672 346 C
09 12833 887 1497 1326 A
10 4101 4154 3848 4440 y
11 4425 3805 3775 4538 w
Type: Heterodimer
Binding TFs: B5KMS8 (Core histone H2A/H2B/H3/H4, Histone-like transcription factor (CBF/NF-Y) and archaeal histone)
B5KMS8
Binding Sites: UN0422.1.18
UN0422.1.12 / UN0422.1.15
UN0422.1.1
UN0422.1.6 / UN0422.1.8
UN0422.1.10 / UN0422.1.12
UN0422.1.11 / UN0422.1.14
UN0422.1.13 / UN0422.1.17
UN0422.1.14 / UN0422.1.19
UN0422.1.15 / UN0422.1.20
UN0422.1.16
UN0422.1.17
UN0422.1.19
UN0422.1.2 / UN0422.1.3
UN0422.1.20
UN0422.1.3 / UN0422.1.5
UN0422.1.4 / UN0422.1.6
UN0422.1.5 / UN0422.1.7
UN0422.1.7 / UN0422.1.9
UN0422.1.10 / UN0422.1.8
UN0422.1.11 / UN0422.1.9
UN0422.1.4
UN0422.1.13
UN0422.1.16
UN0422.1.18
UN0422.1.2

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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.