DNA Binding Motif
| Accessions: | MA1462.1 (JASPAR 2024) |
| Names: | vfl |
| Organisms: | Drosophila melanogaster |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | ChIP-seq |
| Length: | 12 |
| Consensus: | htgCAGGTAgrh |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 2978 3107 2712 2934 h 02 2925 2757 2740 3309 t 03 2283 1953 5193 2302 g 04 52 10668 180 831 C 05 11435 28 163 105 A 06 43 58 11602 28 G 07 91 53 11545 42 G 08 93 689 37 10912 T 09 11460 125 94 52 A 10 2143 1746 6863 979 g 11 3270 2868 3309 2284 r 12 3157 3169 2364 3041 h |
| Type: | Heterodimer |
| Binding TFs: | Q9VWC6 (Zinc finger, C2H2 type, Zinc-finger double-stranded RNA-binding, Zinc-finger of C2H2 type, Zinc-finger double domain, C2H2-type zinc finger) Q9VWC6 |
| Binding Sites: | MA1462.1.1 MA1462.1.10 MA1462.1.11 MA1462.1.12 MA1462.1.13 MA1462.1.14 MA1462.1.15 MA1462.1.16 MA1462.1.17 MA1462.1.18 MA1462.1.19 MA1462.1.2 MA1462.1.20 / MA1462.1.9 MA1462.1.3 MA1462.1.4 MA1462.1.5 MA1462.1.6 MA1462.1.7 MA1462.1.8 |
| Publications: | Harrison MM, Li XY, Kaplan T, Botchan MR, Eisen MB. Zelda binding in the early Drosophila melanogaster embryo marks regions subsequently activated at the maternal-to-zygotic transition. PLoS Genet : (2011). [Pubmed] |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.