DNA Binding Motif

						

			
Accessions: MSX1_HUMAN.H10MO.D|M01336 (HOCOMOCO 10)

			
Libraries: HOCOMOCO 10 1
1 Kulakovskiy IV, Vorontsov IE, Yevshin IS, Soboleva AV, Kasianov AS, Ashoor H, Ba-Alawi W, Bajic VB, Medvedeva YA, Kolpakov FA, Makeev VJ. HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models. Nucleic Acids Res : (2016). [Pubmed]
Length: 18
Consensus: tAATTggtwttTAATTrs
Weblogo: 
PSSM: P0      A      C      G      T
01   4189   3434   2448  20664      t
02  23142   1431   1633   4529      A
03  27825    367    455   2088      A
04   3877    343    652  25863      T
05   2126   1355   1375  25879      T
06   7434    451  17904   4946      g
07   4413   7487  13932   4903      g
08   7384   4312   5321  13718      t
09   8123   5711   4031  12870      w
10   4820   5237   7553  13125      t
11   4075   5680   3486  17494      t
12    109    300     20  30306      T
13  29376     27    786    546      A
14  30728      1      5      1      A
15    119    204    328  30084      T
16    754    920   1266  27795      T
17   9204    822  19610   1099      r
18   3774  10650  12161   4150      s
			
Publications: Kulakovskiy IV, Vorontsov IE, Yevshin IS, Soboleva AV, Kasianov AS, Ashoor H, Ba-Alawi W, Bajic VB, Medvedeva YA, Kolpakov FA, Makeev VJ. HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models. Nucleic Acids Res : (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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