DNA Binding Motif
| Accessions: | MA1104.2 (JASPAR 2024) |
| Names: | GATA6 |
| Organisms: | Homo sapiens |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | ChIP-seq |
| Length: | 13 |
| Consensus: | wwwTCTTATCTtw |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 22320 16229 13432 27463 w 02 20858 14161 11894 32531 w 03 35360 13347 10394 20343 w 04 5912 11831 7066 54635 T 05 4535 62936 6459 5514 C 06 2560 1439 580 74865 T 07 5044 1393 615 72392 T 08 76686 815 819 1124 A 09 1507 852 456 76629 T 10 1096 75930 712 1706 C 11 13149 3228 1810 61257 T 12 18911 19054 18153 23326 t 13 22172 17969 11605 27698 w |
| Type: | Heterodimer |
| Binding TFs: | Q92908 (GATA zinc finger, GATA-type transcription activator, N-terminal ) Q92908 |
| Binding Sites: | MA1104.2.1 MA1104.2.10 / MA1104.2.6 MA1104.2.11 MA1104.2.12 / MA1104.2.7 MA1104.2.13 MA1104.2.14 / MA1104.2.8 MA1104.2.15 MA1104.2.16 / MA1104.2.9 MA1104.2.10 / MA1104.2.17 MA1104.2.11 / MA1104.2.18 MA1104.2.12 / MA1104.2.19 MA1104.2.2 MA1104.2.20 MA1104.2.1 / MA1104.2.3 MA1104.2.4 MA1104.2.2 / MA1104.2.5 MA1104.2.3 / MA1104.2.6 MA1104.2.4 / MA1104.2.7 MA1104.2.5 / MA1104.2.8 MA1104.2.9 MA1104.2.13 MA1104.2.14 MA1104.2.15 MA1104.2.16 MA1104.2.17 MA1104.2.18 MA1104.2.19 MA1104.2.20 |
| Publications: | Shaw-White J. R., Bruno M. D., Whitsett J. A. GATA-6 activates transcription of thyroid transcription factor-1.. J. Biol. Chem. 274:2658-2664 (1999). [Pubmed] |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.