DNA Binding Motif
| Accessions: | MA0136.3 (JASPAR 2024) |
| Names: | Elf5 |
| Organisms: | Mus musculus |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Length: | 12 |
| Consensus: | rgAAGGAAGTrr |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 18899 4570 10613 8064 r 02 9750 9925 15887 6584 g 03 29427 6065 5204 1450 A 04 38778 978 2049 341 A 05 512 182 41025 427 G 06 587 510 40626 423 G 07 40896 580 390 280 A 08 40552 389 481 724 A 09 2609 1234 37803 500 G 10 5180 3355 4948 28663 T 11 12851 7884 13574 7837 r 12 13117 8351 12617 8061 r |
| Type: | Heterodimer |
| Binding TFs: | Q8VDK3 (Ets-domain, Sterile alpha motif (SAM)/Pointed domain) Q8VDK3 |
| Binding Sites: | MA0136.3.1 / MA0136.3.2 MA0136.3.10 / MA0136.3.14 MA0136.3.11 / MA0136.3.16 MA0136.3.12 MA0136.3.13 / MA0136.3.19 MA0136.3.14 / MA0136.3.20 MA0136.3.15 MA0136.3.16 MA0136.3.17 MA0136.3.18 MA0136.3.19 MA0136.3.2 MA0136.3.20 MA0136.3.3 / MA0136.3.4 MA0136.3.4 / MA0136.3.5 MA0136.3.5 / MA0136.3.6 MA0136.3.6 MA0136.3.7 MA0136.3.12 / MA0136.3.8 MA0136.3.9 MA0136.3.1 MA0136.3.10 MA0136.3.11 MA0136.3.13 MA0136.3.15 MA0136.3.17 MA0136.3.18 MA0136.3.3 MA0136.3.8 MA0136.3.9 |
| Publications: | Wei G-H, Badis G, Berger MF, Kivioja T, Palin K, Enge M, Bonke M, Jolma A, Varjosalo M, Gehrke AR, Yan J, Talukder S, Turunen M, Taipale M, Stunnenberg HG, Ukkonen E, Hughes TR, Bulyk ML, Taipale J. Genome-wide analysis of ETS family DNA-binding in vitro and in vivo. The EMBO Journal. Epub 2010 Jun 1. doi:10.1038/emboj.2010.106 [Pubmed] |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.