DNA Binding Motif
| Accessions: | UN0318.1 (JASPAR 2024), MA1725.1 (JASPAR 2024) |
| Names: | ZNF189 |
| Organisms: | Homo sapiens |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | ChIP-seq |
| Length: | 13 |
| Consensus: | chtgCTGTTCCht |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 3137 5788 3162 3859 c 02 5001 4085 2742 4118 h 03 1112 3088 2540 9206 t 04 1467 735 10201 3543 g 05 288 15091 271 296 C 06 318 413 414 14801 T 07 389 919 14163 475 G 08 336 380 254 14976 T 09 160 218 335 15233 T 10 194 15342 181 229 C 11 237 15192 135 382 C 12 4528 6205 1165 4048 h 13 1938 3923 3816 6269 t |
| Type: | Heterodimer |
| Binding TFs: | O75820 (Zinc finger, C2H2 type, KRAB box, Zinc-finger double domain, C2H2-type zinc finger, C2H2-type zinc finger) O75820 |
| Binding Sites: | MA1725.1.1 / MA1725.1.2 / UN0318.1.1 / UN0318.1.2 MA1725.1.9 / UN0318.1.10 UN0318.1.11 UN0318.1.12 MA1725.1.11 / UN0318.1.13 MA1725.1.12 / UN0318.1.14 MA1725.1.14 / UN0318.1.15 MA1725.1.15 / UN0318.1.16 MA1725.1.16 / UN0318.1.17 MA1725.1.17 / UN0318.1.18 UN0318.1.19 UN0318.1.20 MA1725.1.3 / UN0318.1.3 MA1725.1.4 / UN0318.1.4 MA1725.1.5 / UN0318.1.5 UN0318.1.6 MA1725.1.6 / UN0318.1.7 MA1725.1.7 / UN0318.1.8 UN0318.1.9 MA1725.1.10 MA1725.1.13 MA1725.1.18 MA1725.1.19 MA1725.1.20 MA1725.1.8 |
| Publications: | Schmitges FW, Radovani E, Najafabadi HS, Barazandeh M, Campitelli LF, Yin Y, Jolma A, Zhong G, Guo H, Kanagalingam T, Dai WF, Taipale J, Emili A, Greenblatt JF, Hughes TR. Multiparameter functional diversity of human C2H2 zinc finger proteins. Genome Res 26:1742-1752 (2016). [Pubmed] |
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