DNA Binding Motif

						

			
Accessions: MA1947.2 (JASPAR 2024)

			
Names: ETV5::FOXO1
Organisms: Homo sapiens
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: HT-SELEX
Length: 10
Consensus: rtmAACAGGA
Weblogo: 
PSSM: P0      A      C      G      T
01     77     11    160      7      r
02     97     10     90    237      t
03    151     86      9      4      m
04    237     32      1      3      A
05    237      0     44      8      A
06      5    237      0     17      C
07    237     37      7      2      A
08     18      7    237      0      G
09      0      0    237      6      G
10    237      5     20     31      A
Type: Heterodimer
Binding TFs: Q12778 (Fork head domain)
Q12778
			
Publications: Ibarra IL, Hollmann NM, Klaus B, Augsten S, Velten B, Hennig J, Zaugg JB. Mechanistic insights into transcription factor cooperativity and its impact on protein-phenotype interactions. Nat Commun 11:124 (2020). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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