DNA Binding Motif
| Accessions: | MA1629.1 (JASPAR 2024) |
| Names: | Zic2 |
| Organisms: | Mus musculus |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | ChIP-seq |
| Length: | 14 |
| Consensus: | mkCaCAGCAGGrrg |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 3145 3507 2761 2506 m 02 2450 1755 3821 3893 k 03 1161 9933 585 240 C 04 6888 1765 829 2437 a 05 135 11476 188 120 C 06 11074 391 186 268 A 07 140 228 11484 67 G 08 80 11272 269 298 C 09 10625 118 735 441 A 10 192 133 11184 410 G 11 96 204 11465 154 G 12 3060 1476 4911 2472 r 13 3638 1661 4979 1641 r 14 2333 2168 5314 2104 g |
| Type: | Heterodimer |
| Binding TFs: | Q62520 (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger) Q62520 |
| Binding Sites: | MA1629.1.1 MA1629.1.10 / MA1629.1.5 MA1629.1.11 / MA1629.1.7 MA1629.1.12 / MA1629.1.8 MA1629.1.13 / MA1629.1.9 MA1629.1.10 / MA1629.1.14 MA1629.1.15 MA1629.1.11 / MA1629.1.16 MA1629.1.17 MA1629.1.18 MA1629.1.12 / MA1629.1.19 MA1629.1.1 / MA1629.1.2 MA1629.1.20 MA1629.1.3 MA1629.1.4 MA1629.1.5 MA1629.1.2 / MA1629.1.6 MA1629.1.7 MA1629.1.8 MA1629.1.4 / MA1629.1.9 MA1629.1.13 MA1629.1.14 MA1629.1.15 MA1629.1.16 MA1629.1.17 MA1629.1.18 MA1629.1.19 MA1629.1.20 MA1629.1.3 MA1629.1.6 |
| Publications: | Salero E., Perez-Sen R., Aruga J., Gimenez C., Zafra F. Transcription factors Zic1 and Zic2 bind and transactivate the apolipoprotein E gene promoter. J. Biol. Chem. 276:1881-1888 (2001). [Pubmed] |
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