DNA Binding Motif

						

			
Accessions: IRX5_DBD (HumanTF 1.0)

			
Names: IRX5
Organisms: Homo sapiens
Libraries: HumanTF 1.0 1
1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]
Notes: Site type: dimeric; SELEX cycle: 3
Length: 12
Consensus: twACAyrACAwg
Weblogo: 
PSSM: P0      A      C      G      T
01    306    288    319    494      t
02    685     88    307    721      w
03   1406     39    161     59      A
04     72   1406     60     77      C
05   1406     38     94     29      A
06    181    567     31    839      y
07    576     77    830    253      r
08   1406    137     89    147      A
09    215   1406    116    160      C
10   1406     79    209    246      A
11    593    343     96    813      w
12    259    301    618    228      g
Binding TFs: IRX5_DBD (Homeobox domain, Homeobox KN domain)
			
Publications: Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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