DNA Binding Motif

						

			
Accessions: 2c6y_AB (3D-footprint 20231221)

			
Names: FORKHEAD BOX PROTEIN K2
Organisms: Homo sapiens
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: Crystal structure of interleukin enhancer-binding factor 1 bound to DNA
Length: 11
Consensus: TAAACAATACA
Weblogo: 
PSSM: P0      A      C      G      T
01      1      6      0     89      T
02     96      0      0      0      A
03     90      0      6      0      A
04     68      6      6     16      A
05      6     75      6      9      C
06     78      6      6      6      A
07     96      0      0      0      A
08      0      0      0     96      T
09     90      0      0      6      A
10      0     96      0      0      C
11     96      0      0      0      A
Type: Heterodimer
Binding TFs: 2c6y_A (Fork head domain)
2c6y_B (Fork head domain)
Binding Sites: 2c6y_C
2c6y_D
			
Publications: Tsai K.L, Huang C.Y, Chang C.H, Sun Y.J, Chuang W.J, Hsiao C.D. Crystal structure of the human FOXK1a-DNA complex and its implications on the diverse binding specificity of winged helix/forkhead proteins. The Journal of biological chemistry 281:17400-9 (2006). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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