DNA Binding Motif

						

			
Accessions: THRB_4 (HT-SELEX2 May2017)

			
Names: THRB
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 16
Consensus: arrGGTCrTGACCyyt
Weblogo: 
PSSM: P0      A      C      G      T
01    806    509    457    518      a
02   1010    333   1280    260      r
03   1247     21   1043     33      r
04     13     27   2289     56      G
05     41     10   2289    429      G
06     18     80    192   2289      T
07     35   2289     50    242      C
08   1196      4   1093      3      r
09      9    119     15   2289      T
10    202     29   2289      6      G
11   2289    128     21     24      A
12    356   2289     10     10      C
13     25   2289     12     13      C
14      5    948     16   1341      y
15    288   1199    366   1091      y
16    465    454    545    826      t
Binding TFs: THRB (Zinc finger, C4 type (two domains))
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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