DNA Binding Motif

Accessions: MA1122.1 (JASPAR 2024)
Names: TFDP1
Organisms: Homo sapiens
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: ChIP-seq
Length: 11
Consensus: gsGCGGGAAss
Weblogo:
PSSM: P0 A C G T
01 411 491 777 328 g
02 263 684 940 120 s
03 48 71 1862 26 G
04 28 1886 22 71 C
05 14 54 1932 7 G
06 36 80 1865 26 G
07 27 32 1919 29 G
08 1855 24 98 30 A
09 1645 170 137 55 A
10 465 647 648 247 s
11 381 604 648 374 s
Type: Heterodimer
Binding TFs: Q14186 (E2F/DP family winged-helix DNA-binding domain, Transcription factor DP)
Q14186
Binding Sites: MA1122.1.1
MA1122.1.10 / MA1122.1.11
MA1122.1.12
MA1122.1.13
MA1122.1.14
MA1122.1.15
MA1122.1.16
MA1122.1.17
MA1122.1.18
MA1122.1.19
MA1122.1.2
MA1122.1.20
MA1122.1.3
MA1122.1.4
MA1122.1.5
MA1122.1.6
MA1122.1.7
MA1122.1.8
MA1122.1.9
Publications: Zhang Y, Venkatraj VS, Fischer SG, Warburton D, Chellappan SP. Genomic cloning and chromosomal assignment of the E2F dimerization partner TFDP gene family. Genomics 39:95-8 (1997). [Pubmed]

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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.