DNA Binding Motif
| Accessions: | MGA_DBD_1 (HumanTF 1.0), MA0801.1 (JASPAR 2024) |
| Names: | MGA |
| Organisms: | Homo sapiens |
| Libraries: | HumanTF 1.0 1, JASPAR 2024 2 1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed] 2 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | Site type: monomeric; SELEX cycle: 3, HT-SELEX |
| Length: | 8 |
| Consensus: | AGGTGTGA |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 30489 1151 8873 4160 A 02 4310 3737 30489 1929 G 03 16 509 30489 104 G 04 12 3534 96 30489 T 05 14 1 30489 11 G 06 1042 3089 381 30489 T 07 689 1753 30489 6465 G 08 30489 110 920 274 A |
| Type: | Heterodimer |
| Binding TFs: | MGA_DBD (T-box) Q8IWI9 (Helix-loop-helix DNA-binding domain, T-box) Q8IWI9 (Helix-loop-helix DNA-binding domain, T-box) Q8IWI9 |
| Publications: | Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed] Wilson V, Conlon FL. The T-box family. Genome Biol : (2002;3(6):REVIEWS3008.). [Pubmed] |
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