DNA Binding Motif
| Accessions: | 4kfc_B (3D-footprint 20231221) |
| Names: | KDP operon transcriptional regulatory protein KdpE |
| Organisms: | Escherichia coli, strain K12 |
| Libraries: | 3D-footprint 20231221 1 1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed] |
| Description: | Crystal structure of a hyperactive mutant of response regulator KdpE complexed to its promoter DNA |
| Length: | 5 |
| Consensus: | TGTAA |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 0 0 0 96 T 02 9 9 69 9 G 03 9 11 9 67 T 04 96 0 0 0 A 05 67 9 11 9 A |
| Binding TFs: | 4kfc_B (Response regulator receiver domain, Transcriptional regulatory protein, C terminal) |
| Binding Sites: | 4kfc_Y 4kfc_Z |
| Publications: | Narayanan A, Kumar S, Evrard A.N, Paul L.N, Yernool D.A. An asymmetric heterodomain interface stabilizes a response regulator-DNA complex. Nature communications 5:3282 (2014). [Pubmed] |
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