DNA Binding Motif

						

			
Accessions: UN0369.1 (JASPAR 2024)

			
Names: NAC004
Organisms: Arabidopsis thaliana
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Length: 24
Consensus: dwTgCTTaTwwrAgAAGTTtcwww
Weblogo: 
PSSM: P0      A      C      G      T
01    163    121    162    166      d
02    177     89     88    258      w
03    129     29     25    429      T
04    130     43    370     69      g
05      3    600      5      4      C
06      2      0      4    606      T
07      3      0      4    605      T
08    347    110    139     16      a
09     48     93     42    429      T
10    166    120    132    194      w
11    174    118    151    169      w
12    184     83    226    119      r
13    463     39     59     51      A
14     19    129    330    134      g
15    604      3      3      2      A
16    601      2      3      6      A
17      5      1    603      3      G
18     29     68     50    465      T
19     83     28     20    481      T
20    140     62     58    352      t
21    131    303     86     92      c
22    156     98     68    290      w
23    163    105    128    216      w
24    181    118    129    184      w
Type: Heterodimer
Binding TFs: O81913 (No apical meristem (NAM) protein)
O81913
Binding Sites: UN0369.1.1
UN0369.1.10
UN0369.1.11
UN0369.1.12
UN0369.1.13
UN0369.1.14
UN0369.1.15
UN0369.1.16
UN0369.1.17
UN0369.1.18
UN0369.1.19
UN0369.1.2
UN0369.1.20
UN0369.1.3
UN0369.1.4
UN0369.1.5
UN0369.1.6
UN0369.1.7
UN0369.1.8
UN0369.1.9
			
	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.