DNA Binding Motif

						

			
Accessions: ERF_FOXI1_1 (HumanTF2 1.0)

			
Names: ERF_FOXI1
Organisms: Homo sapiens
Libraries: HumanTF2 1.0 1
1 Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]
Notes: Site type: heterodimeric; Experiment type: CAP-SELEX
Length: 13
Consensus: rcCGGAwGTtkwy
Weblogo: 
PSSM: P0      A      C      G      T
01   1214    334   1064    415      r
02    368   1592    686    236      c
03    204   2278     45     39      C
04     17     34   2278     30      G
05     28      0   2278     28      G
06   2278     57     31      0      A
07   1581     46     42   2278      w
08     91     36   2278     26      G
09     77    170     28   2278      T
10    365    170    783   2278      t
11    300    156    909   1369      k
12   1305    477    322    973      w
13    133    939    562    643      y
Type: Heterodimer
Binding TFs: FOXI1_TF2 (Fork head domain)
ERF_TF1 (Ets-domain)
			
Publications: Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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