DNA Binding Motif

						

			
Accessions: NFIC_HUMAN.H10MO.A|M01364 (HOCOMOCO 10)

			
Names: NFIC
Organisms: Homo sapiens
Libraries: HOCOMOCO 10 1
1 Kulakovskiy IV, Vorontsov IE, Yevshin IS, Soboleva AV, Kasianov AS, Ashoor H, Ba-Alawi W, Bajic VB, Medvedeva YA, Kolpakov FA, Makeev VJ. HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models. Nucleic Acids Res : (2016). [Pubmed]
Notes: Nuclear factor 1{7.1.2}; NF-1C (NF-IC){7.1.2.0.3}
Length: 17
Consensus: tyyTGGCwsmswkCCmr
Weblogo: 
PSSM: P0      A      C      G      T
01    106    110     77    207      t
02     21    280     52    147      y
03      9    193      7    291      y
04     12      6     14    468      T
05      3      2    492      3      G
06      2      6    488      4      G
07     41    443     12      4      C
08    261     48     20    171      w
09     77    139    204     80      s
10    145    146     99    110      m
11    113    144    166     77      s
12    167     51    110    172      w
13     26     78    241    155      k
14     43    378     10     69      C
15     21    443     13     23      C
16    256    176     17     51      m
17    223     66    142     69      r
Binding TFs: NFIC_HUMAN (CTF/NF-I family transcription modulation region, MH1 domain, Nuclear factor I protein pre-N-terminus)
			
Publications: Kulakovskiy IV, Vorontsov IE, Yevshin IS, Soboleva AV, Kasianov AS, Ashoor H, Ba-Alawi W, Bajic VB, Medvedeva YA, Kolpakov FA, Makeev VJ. HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models. Nucleic Acids Res : (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
Disclaimer and license


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.