DNA Binding Motif

Accessions: UN0844.1 (JASPAR 2024)
Names: C3H36
Organisms: Arabidopsis thaliana
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: DAP-seq
Length: 9
Consensus: AAAAAGkwr
Weblogo:
PSSM: P0 A C G T
01 716 98 118 66 A
02 761 21 0 216 A
03 1000 0 0 0 A
04 1000 0 0 0 A
05 985 0 15 0 A
06 0 0 1000 0 G
07 98 130 346 425 k
08 273 105 171 450 w
09 585 15 298 101 r
Type: Heterodimer
Binding TFs: Q9C7C3 (KH domain, Zinc finger C-x8-C-x5-C-x3-H type (and similar), KH domain)
Q9C7C3

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