DNA Binding Motif

						

			
Accessions: M0122 (AthalianaCistrome v4_May2016)

			
Names: ERF6.DAP, T18744;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 21
Consensus: ccdyckCCGCCGCCrymrcmg
Weblogo: 
PSSM: P0      A      C      G      T
01     84    267     71     91      c
02     98    244     52    119      c
03    136     75    157    145      d
04     69    255     54    135      y
05     95    317     15     86      c
06    101     43    192    177      k
07     11    367     84     51      C
08     39    471      3      0      C
09      5      0    507      1      G
10      0    512      1      0      C
11      0    513      0      0      C
12      6      0    507      0      G
13      0    497      0     16      C
14      0    513      0      0      C
15    210      2    255     46      r
16     49    279     49    136      y
17    129    214     43    127      m
18    200     35    152    126      r
19     93    240     62    118      c
20    129    223     43    118      m
21    125     78    184    126      g
Binding TFs: T18744 (AP2 domain)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.