DNA Binding Motif

Accessions: 2irf_L (3D-footprint 20231221)
Names: INTERFERON REGULATORY FACTOR 2
Organisms: Mus musculus
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: CRYSTAL STRUCTURE OF AN IRF-2/DNA COMPLEX.
Length: 5
Consensus: GTGTA
Weblogo:
PSSM: P0 A C G T
01 9 7 73 7 G
02 9 7 7 73 T
03 7 7 73 9 G
04 7 7 9 73 T
05 96 0 0 0 A
Binding TFs: 2irf_L (Interferon regulatory factor transcription factor)
Binding Sites: 2irf_A / 2irf_C
2irf_D / 2irf_F
Publications: Fujii Y, Shimizu T, Kusumoto M, Kyogoku Y, Taniguchi T, Hakoshima T. Crystal structure of an IRF-DNA complex reveals novel DNA recognition and cooperative binding to a tandem repeat of core sequences. The EMBO journal 18:5028-41 (1999). [Pubmed]

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