DNA Binding Motif

						

			
Accessions: M0725 (AthalianaCistrome v4_May2016)

			
Names: REM19.DAP, T00551;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 15
Consensus: ramAAAAAAAAAaAa
Weblogo: 
PSSM: P0      A      C      G      T
01    287     90    186     10      r
02    333    139     46     55      a
03    289    221     63      0      m
04    476     31     66      0      A
05    451     26     96      0      A
06    569      3      0      1      A
07    480     61      7     25      A
08    571      1      0      1      A
09    523     44      0      6      A
10    549      0      3     21      A
11    490     16      9     58      A
12    526      6     41      0      A
13    387     32     34    120      a
14    394    120     59      0      A
15    383     51     87     52      a
Binding TFs: T00551 (B3 DNA binding domain)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
Disclaimer and license


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.