DNA Binding Motif
| Accessions: | MA0014.4 (JASPAR 2024) |
| Names: | PAX5 |
| Organisms: | Homo sapiens |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | ChIP-seq |
| Length: | 8 |
| Consensus: | GCGTGACC |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 18 151 1231 12 G 02 18 1276 34 84 C 03 111 35 1243 23 G 04 94 88 30 1200 T 05 16 37 1355 4 G 06 1243 39 70 60 A 07 32 1305 57 18 C 08 69 1081 118 144 C |
| Type: | Heterodimer |
| Binding TFs: | Q02548 ('Paired box' domain, Paired-box protein 2 C terminal) Q02548 |
| Binding Sites: | MA0014.4.11 / MA0014.4.6 MA0014.4.13 MA0014.4.1 MA0014.4.10 / MA0014.4.9 MA0014.4.12 MA0014.4.14 / MA0014.4.2 MA0014.4.15 MA0014.4.16 / MA0014.4.18 / MA0014.4.20 / MA0014.4.7 MA0014.4.17 MA0014.4.19 MA0014.4.3 MA0014.4.4 MA0014.4.5 MA0014.4.8 |
| Publications: | Czerny T., Schaffner G., Busslinger M. DNA sequence recognition by Pax proteins: bipartite structure of the paired domain and its binding site. Genes Dev. 7:2048-2061 (1993). [Pubmed] |
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