DNA Binding Motif

						

			
Accessions: 2p5l_D (3D-footprint 20231221)

			
Names: Arginine repressor
Organisms: Bacillus subtilis, strain 168
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: Crystal structure of a dimer of N-terminal domains of AhrC in complex with an 18bp DNA operator site
Length: 6
Consensus: aAtTCA
Weblogo: 
PSSM: P0      A      C      G      T
01     54     16     13     13      a
02     96      0      0      0      A
03     13     16     13     54      t
04      0      0      0     96      T
05      0     96      0      0      C
06     96      0      0      0      A
Binding TFs: 2p5l_D (Arginine repressor, DNA binding domain)
Binding Sites: 2p5l_A
2p5l_B
			
Publications: Garnett J.A, Marincs F, Baumberg S, Stockley P.G, Phillips S.E. Structure and function of the arginine repressor-operator complex from Bacillus subtilis. Journal of molecular biology 379:284-98 (2008). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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