DNA Binding Motif

						

			
Accessions: MA1727.1 (JASPAR 2024)

			
Names: ZNF417
Organisms: Homo sapiens
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: ChIP-exo
Length: 15
Consensus: mrbrytgGGCGCCAm
Weblogo: 
PSSM: P0      A      C      G      T
01    301 324.85 235.03    139      m
02    427    121 264.97    187      r
03    115 324.85    253    307      b
04    313    241    301 145.21      r
05 205.09    289    199    307      y
06    211    139     79    570      t
07    169    199    469    163      g
08   1.50   1.50    996   1.50      G
09   1.50   1.50    996   1.50      G
10   7.49    936   1.50     55      C
11   1.50   1.50    996   1.50      G
12   1.50    990   1.50   7.49      C
13     31    954   1.50     13      C
14    984     13   1.50   1.50      A
15    439 324.85    157     79      m
Type: Heterodimer
Binding TFs: Q8TAU3 (Zinc finger, C2H2 type, KRAB box, Zinc-finger double domain, C2H2-type zinc finger, C2H2-type zinc finger)
Q8TAU3
			
Publications: Turelli P, Playfoot C, Grun D, Raclot C, Pontis J, Coudray A, Thorball C, Duc J, Pankevich EV, Deplancke B, Busskamp V, Trono D. Primate-restricted KRAB zinc finger proteins and target retrotransposons control gene expression in human neurons. Sci Adv : (2020). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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