DNA Binding Motif
Accessions: | 1hbx_ABG (3D-footprint 20231221) |
Names: | SERUM RESPONSE FACTOR |
Organisms: | Homo sapiens |
Libraries: | 3D-footprint 20231221 1 1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed] |
Description: | Ternary Complex of SAP-1 and SRF with specific SRE DNA |
Length: | 16 |
Consensus: | CGGAAnTCCTAATTAG |
Weblogo: | |
PSSM: | P0 A C G T 01 0 96 0 0 C 02 0 0 96 0 G 03 0 0 96 0 G 04 96 0 0 0 A 05 85 2 4 5 A 06 24 24 24 24 n 07 8 11 8 69 T 08 0 96 0 0 C 09 13 74 7 2 C 10 5 8 6 77 T 11 96 0 0 0 A 12 77 5 2 12 A 13 5 10 7 74 T 14 0 0 0 96 T 15 78 2 8 8 A 16 0 0 96 0 G |
Type: | Heterodimer |
Binding TFs: | 1hbx_A (SRF-type transcription factor (DNA-binding and dimerisation domain)) 1hbx_B (SRF-type transcription factor (DNA-binding and dimerisation domain)) 1hbx_G (Ets-domain) |
Binding Sites: | 1hbx_C 1hbx_W |
Publications: | Hassler M., Richmond T. J. The B-box dominates SAP-1-SRF interactions in the structure of the ternary complex.. EMBO J. 20:3018-3028 (2001). [Pubmed] |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.