DNA Binding Motif

						

			
Accessions: M0218 (AthalianaCistrome v4_May2016)

			
Names: AREB3.ampDAP, T14170;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 15
Consensus: dwwggwsACGTGKCA
Weblogo: 
PSSM: P0      A      C      G      T
01    229     48    156    160      d
02    234     53    137    169      w
03    193     44     88    268      w
04     71     42    337    143      g
05    130     79    352     32      g
06    272     83      0    238      w
07      0    356    227     10      s
08    593      0      0      0      A
09      0    592      1      0      C
10      0      0    593      0      G
11      0      0      0    593      T
12      0      0    593      0      G
13      0      0    425    168      K
14      3    590      0      0      C
15    474     39     57     23      A
Binding TFs: T14170 (bZIP transcription factor, Basic region leucine zipper)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.