DNA Binding Motif

						

			
Accessions: UN0362.1 (JASPAR 2024)

			
Names: EICBP-B, EICBP.B
Organisms: Arabidopsis thaliana
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: DAP-seq
Length: 16
Consensus: wwcAAAaCGCGTgaaw
Weblogo: 
PSSM: P0      A      C      G      T
01    302    175    186    243      w
02    291    180    169    266      w
03    224    292    224    166      c
04    644     65     84    113      A
05    762     30     48     66      A
06    791     23     47     45      A
07    610     97    182     17      a
08      7    888      3      8      C
09     28      9    861      8      G
10     18    839      6     43      C
11      9      3    889      5      G
12     10     10     21    865      T
13     95     53    596    162      g
14    530     52    143    181      a
15    343    153    200    210      a
16    281    168    225    232      w
Binding TFs: F4KCL4 (Ankyrin repeat, IQ calmodulin-binding motif, CG-1 domain, Ankyrin repeats (3 copies))
Binding Sites: UN0362.1.1
UN0362.1.10
UN0362.1.11 / UN0362.1.2
UN0362.1.12
UN0362.1.13
UN0362.1.14
UN0362.1.15
UN0362.1.16
UN0362.1.17
UN0362.1.18 / UN0362.1.3
UN0362.1.19 / UN0362.1.4
UN0362.1.2
UN0362.1.20 / UN0362.1.5
UN0362.1.3
UN0362.1.4
UN0362.1.5
UN0362.1.6
UN0362.1.1 / UN0362.1.7
UN0362.1.8
UN0362.1.9
UN0362.1.10
UN0362.1.11
UN0362.1.12
UN0362.1.13
UN0362.1.14
UN0362.1.15
UN0362.1.16
UN0362.1.17
UN0362.1.18
UN0362.1.19
UN0362.1.20
UN0362.1.6
UN0362.1.7
UN0362.1.8
UN0362.1.9
			
	
			


			

				

				
				
				
				

			

			

		

	
Disclaimer and license


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.