DNA Binding Motif
| Accessions: | HOXB13_TBX21_2_3 (HumanTF2 1.0) |
| Names: | HOXB13_TBX21 |
| Organisms: | Homo sapiens |
| Libraries: | HumanTF2 1.0 1 1 Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed] |
| Notes: | Site type: heterodimeric; Experiment type: CAP-SELEX |
| Length: | 16 |
| Consensus: | rgGTGTgAatTtATkr |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 311 40 183 104 r 02 70 101 240 104 g 03 4 24 311 34 G 04 24 35 7 311 T 05 2 0 311 18 G 06 54 64 11 311 T 07 12 58 216 95 g 08 311 35 74 30 A 09 100 74 59 77 a 10 62 62 59 311 t 11 68 2 0 311 T 12 115 29 35 311 t 13 311 17 34 43 A 14 23 91 8 311 T 15 65 11 134 101 k 16 89 21 154 47 r |
| Type: | Heterodimer |
| Binding TFs: | HOXB13_TF1 / HOXB13_TF2 (Homeobox domain) TBX21_TF2 (T-box) HOXB13_Full (Homeobox domain, Hox protein A13 N terminal) |
| Publications: | Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed] |
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