DNA Binding Motif

						

			
Accessions: M0801 (AthalianaCistrome v4_May2016)

			
Names: T17824;, WRKY18.ampDAP
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 13
Consensus: ygTTGACTtttty
Weblogo: 
PSSM: P0      A      C      G      T
01     57    294     62    187      y
02     77    105    309    109      g
03      4      1      1    594      T
04      5      0      0    595      T
05      0      0    597      3      G
06    594      1      4      1      A
07      0    598      0      2      C
08      1    146      2    451      T
09    113     38     54    395      t
10    100     68     81    351      t
11     87    121    140    252      t
12    132    103    130    235      t
13    140    164     91    205      y
Binding TFs: T17824 (WRKY DNA -binding domain)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.