DNA Binding Motif

						

			
Accessions: MA0390.1 (JASPAR 2024)

			
Names: STB3
Organisms: Saccharomyces cerevisiae
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: PBM
Length: 21
Consensus: gtyyaaAwTTTTTCActyhkk
Weblogo: 
PSSM: P0      A      C      G      T
01     98    168    546    185      g
02    166    173    202    457      t
03    182    415     57    343      y
04    194    379    107    318      y
05    507     59    189    243      a
06    547    120    151    181      a
07    776     35     71    116      A
08    499     27     33    440      w
09     99     11      2    886      T
10     53      5      1    939      T
11     10      4      2    982      T
12     13      0     15    970      T
13      0     64     20    915      T
14      3    990      2      4      C
15    965      7     25      2      A
16    150    587     84    177      c
17    129    120    137    613      t
18    166    326    200    306      y
19    308    253    125    312      h
20    233    170    315    280      k
21    226    182    296    293      k
Type: Heterodimer
Binding TFs: Q12427 (Putative Sin3 binding protein)
Q12427
			
Publications: Newburger D.E, Bulyk M.L. UniPROBE: an online database of protein binding microarray data on protein-DNA interactions. Nucleic acids research 37:D77-82 (2009). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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