DNA Binding Motif

						

			
Accessions: POU5F1_4 (HT-SELEX2 May2017)

			
Names: POU5F1
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 16
Consensus: rawTATGywAATkarg
Weblogo: 
PSSM: P0      A      C      G      T
01   2968   2265   2814   1723      r
02   6672   1947   3277   3098      a
03   3282    374    931   6488      w
04    208     25      0   9770      T
05   9770      0      0      0      A
06      1      1      3   9770      T
07      3      3   9770      0      G
08     20   9770    332   5904      y
09   8481      1      0   9770      w
10   9770      2      1      1      A
11   9770      0      1      0      A
12     42      0      0   9770      T
13     79    295   4478   5292      k
14   9770    793   2216   2255      a
15   4950   2607   4820    709      r
16    758   2337   4395   2280      g
Binding TFs: POU5F1 (Homeobox domain, Pou domain - N-terminal to homeobox domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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