DNA Binding Motif

						

			
Accessions: M0697 (AthalianaCistrome v4_May2016)

			
Names: CUC2.ampDAP, T22017;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 16
Consensus: TwaCkTGtrrmaCAmG
Weblogo: 
PSSM: P0      A      C      G      T
01     95      3      1    482      T
02    247      0    130    204      w
03    331     69    144     37      a
04     10    570      0      1      C
05      2      0    394    185      k
06      0      0      0    581      T
07    139     14    425      3      G
08    141    104     25    311      t
09    190     86    162    143      r
10    170    105    169    137      r
11    193    147    115    126      m
12    387     27     83     84      a
13      6    454     68     53      C
14    581      0      0      0      A
15    345    236      0      0      m
16      0      0    571     10      G
Binding TFs: T22017 (No apical meristem (NAM) protein)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
Disclaimer and license


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.