DNA Binding Motif

						

			
Accessions: M0083 (AthalianaCistrome v4_May2016)

			
Names: DDF1.DAP, T00104;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 15
Consensus: hgATGTCGRCrrmrr
Weblogo: 
PSSM: P0      A      C      G      T
01    154    175     77    194      h
02     81    147    235    137      g
03    468      9     72     51      A
04     31     68     20    481      T
05      0      0    600      0      G
06      1      0      0    599      T
07      0    600      0      0      C
08      0      0    600      0      G
09    175      1    424      0      R
10      0    455      0    145      C
11    222     68    236     74      r
12    265     71    175     89      r
13    168    177    119    136      m
14    153     71    248    128      r
15    191     90    184    135      r
Binding TFs: T00104 (AP2 domain)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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